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Douglas Theobald
Douglas Theobald
Professor of Biochemistry, Brandeis University
Verified email at brandeis.edu - Homepage
Title
Cited by
Cited by
Year
Nucleic acid recognition by OB-fold proteins
DL Theobald, RM Mitton-Fry, DS Wuttke
Annual review of biophysics and biomolecular structure 32 (1), 115-133, 2003
5832003
Analysis of Drosophila TRPA1 reveals an ancient origin for human chemical nociception
K Kang, SR Pulver, VC Panzano, EC Chang, LC Griffith, DL Theobald, ...
Nature 464 (7288), 597-600, 2010
3632010
A formal test of the theory of universal common ancestry
DL Theobald
Nature 465 (7295), 219-222, 2010
3382010
Likelihood-based classification of cryo-EM images using FREALIGN
D Lyumkis, AF Brilot, DL Theobald, N Grigorieff
Journal of structural biology 183 (3), 377-388, 2013
2782013
A gustatory receptor paralogue controls rapid warmth avoidance in Drosophila
L Ni, P Bronk, EC Chang, AM Lowell, JO Flam, VC Panzano, DL Theobald, ...
Nature 500 (7464), 580-584, 2013
2302013
THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures
DL Theobald, DS Wuttke
Bioinformatics 22 (17), 2171-2172, 2006
2282006
Rapid calculation of RMSDs using a quaternion-based characteristic polynomial
DL Theobald
Acta Crystallographica Section A: Foundations of Crystallography 61 (4), 478-480, 2005
2092005
Evolutionary drivers of thermoadaptation in enzyme catalysis
V Nguyen, C Wilson, M Hoemberger, JB Stiller, RV Agafonov, S Kutter, ...
Science 355 (6322), 289-294, 2017
1892017
Using ancient protein kinases to unravel a modern cancer drug’s mechanism
C Wilson, RV Agafonov, M Hoemberger, S Kutter, A Zorba, J Halpin, ...
Science 347 (6224), 882-886, 2015
1832015
Fast determination of the optimal rotational matrix for macromolecular superpositions
P Liu, DK Agrafiotis, DL Theobald
Journal of computational chemistry 31 (7), 1561-1563, 2010
1282010
Structural basis for telomeric single-stranded DNA recognition by yeast Cdc13
RM Mitton-Fry, EM Anderson, DL Theobald, LW Glustrom, DS Wuttke
Journal of molecular biology 338 (2), 241-255, 2004
1252004
Accurate structural correlations from maximum likelihood superpositions
DL Theobald, DS Wuttke
PLoS computational biology 4 (2), e43, 2008
1152008
Empirical Bayes hierarchical models for regularizing maximum likelihood estimation in the matrix Gaussian Procrustes problem
DL Theobald, DS Wuttke
Proceedings of the National Academy of Sciences 103 (49), 18521-18527, 2006
1042006
Optimal simultaneous superpositioning of multiple structures with missing data
DL Theobald, PA Steindel
Bioinformatics 28 (15), 1972-1979, 2012
992012
An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases
JI Boucher, JR Jacobowitz, BC Beckett, S Classen, DL Theobald
Elife 3, e02304, 2014
882014
Potassium-selective block of barium permeation through single KcsA channels
KN Piasta, DL Theobald, C Miller
Journal of General Physiology 138 (4), 421-436, 2011
772011
Prediction of multiple tandem OB-fold domains in telomere end-binding proteins Pot1 and Cdc13
DL Theobald, DS Wuttke
Structure 12 (10), 1877-1879, 2004
772004
An empirical test of convergent evolution in rhodopsins
KA Mackin, RA Roy, DL Theobald
Molecular biology and evolution 31 (1), 85-95, 2014
662014
Divergent evolution within protein superfolds inferred from profile-based phylogenetics
DL Theobald, DS Wuttke
Journal of molecular biology 354 (3), 722-737, 2005
622005
Structure determination of high-energy states in a dynamic protein ensemble
JB Stiller, R Otten, D Häussinger, PS Rieder, DL Theobald, D Kern
Nature 603 (7901), 528-535, 2022
572022
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