Murat Can Cobanoglu
Murat Can Cobanoglu
Exact Sciences
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Predicting drug–target interactions using probabilistic matrix factorization
MC Cobanoglu, C Liu, F Hu, ZN Oltvai, I Bahar
Journal of chemical information and modeling 53 (12), 3399-3409, 2013
Insights into the modulation of dopamine transporter function by amphetamine, orphenadrine, and cocaine binding
MH Cheng, E Block, F Hu, MC Cobanoglu, A Sorkin, I Bahar
Frontiers in neurology 6, 134, 2015
A genome-wide RNAi screen identifies potential drug targets in a C. elegans model of α1-antitrypsin deficiency
LP O'Reilly, OS Long, MC Cobanoglu, JA Benson, CJ Luke, MT Miedel, ...
Human molecular genetics 23 (19), 5123-5132, 2014
BalestraWeb: efficient online evaluation of drug–target interactions
MC Cobanoglu, ZN Oltvai, DL Taylor, I Bahar
Bioinformatics 31 (1), 131-133, 2015
Classification of GPCRs using family specific motifs
MC Cobanoglu, Y Saygin, U Sezerman
IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (6 …, 2010
An image-based assay to quantify changes in proliferation and viability upon drug treatment in 3D microenvironments
VS Murali, BJ Chang, R Fiolka, G Danuser, MC Cobanoglu, ES Welf
BMC cancer 19, 1-17, 2019
An analog of glibenclamide selectively enhances autophagic degradation of misfolded α1-antitrypsin Z
Y Wang, MC Cobanoglu, J Li, T Hidvegi, P Hale, M Ewing, AS Chu, ...
PLoS One 14 (1), e0209748, 2019
Preoperative prediction of lymph node metastasis from clinical DCE MRI of the primary breast tumor using a 4D CNN
S Nguyen, D Polat, P Karbasi, D Moser, L Wang, K Hulsey, ...
Medical Image Computing and Computer Assisted Intervention–MICCAI 2020: 23rd …, 2020
The present and future role of artificial intelligence and machine learning in anesthesiology
JC Alexander, BT Romito, MC Çobanoglu
International anesthesiology clinics 58 (4), 7-16, 2020
Connecting neuronal cell protective pathways and drug combinations in a Huntington’s disease model through the application of quantitative systems pharmacology
F Pei, H Li, MJ Henderson, SA Titus, A Jadhav, A Simeonov, ...
Scientific Reports 7 (1), 17803, 2017
Deep learning development environment in virtual reality
KC VanHorn, M Zinn, MC Cobanoglu
arXiv preprint arXiv:1906.05925, 2019
Glyphlink: An interactive visualization approach for semantic graphs
M Cayli, MC Cobanoglu, S Balcisoy
Journal of Visual Languages & Computing 24 (6), 463-471, 2013
Ionizing irradiation protection and mitigation of murine cells by carbamazepine is p53 and autophagy independent
H Kim, ME Bernard, A Farkas, J Goff, R Kalash, F Houghton, D Shields, ...
in vivo 26 (3), 341-354, 2012
Democratizing AI in biomedical image classification using virtual reality
K VanHorn, MC Çobanoğlu
Virtual Reality 26 (1), 159-171, 2022
Accurate differential analysis of transcription factor activity from gene expression
V Amin, D Ağaç, SD Barnes, MC Çobanoğlu
Bioinformatics 35 (23), 5018-5029, 2019
Evaluating Melanoma Viability and Proliferation in 3D Microenvironments
V Siruvallur Murali, MC Cobanoglu, ES Welf
Melanoma: Methods and Protocols, 155-171, 2021
Adrenergic signaling controls early transcriptional programs during CD8+ T cell responses to viral infection
LD Estrada, D Ağaç Çobanoğlu, A Wise, RW Maples, MC Çobanoğlu, ...
PloS one 17 (8), e0272017, 2022
Comparison of mobile device navigation information display alternatives from the cognitive load perspective
MC Cobanoglu, AA Kindiroglu, S Balcisoy
Engineering Psychology and Cognitive Ergonomics: 8th International …, 2009
Haisu: Hierarchically supervised nonlinear dimensionality reduction
KC VanHorn, MC Çobanoğlu
PLoS Computational Biology 18 (7), e1010351, 2022
Cancer drug discovery as a low rank tensor completion problem
VS Murali, D Ağaç Çobanoğlu, M Hsieh, M Zinn, VS Malladi, J Gesell, ...
bioRxiv, 2021.03. 08.434311, 2021
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