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Nilisha Pokhrel
Nilisha Pokhrel
Verified email at marquette.edu
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Cited by
Cited by
Year
A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA
LA Yates, RJ Aramayo, N Pokhrel, CC Caldwell, JA Kaplan, RL Perera, ...
Nature communications 9 (1), 5447, 2018
1232018
Evidence That the Pi Release Event Is the Rate-Limiting Step in the Nitrogenase Catalytic Cycle
ZY Yang, R Ledbetter, S Shaw, N Pence, M Tokmina-Lukaszewska, ...
Biochemistry 55 (26), 3625-3635, 2016
1072016
Dynamics and selective remodeling of the DNA-binding domains of RPA
N Pokhrel, CC Caldwell, EI Corless, EA Tillison, J Tibbs, N Jocic, ...
Nature structural & molecular biology 26 (2), 129-136, 2019
932019
Monitoring Replication Protein A (RPA) dynamics in homologous recombination through site-specific incorporation of non-canonical amino acids
N Pokhrel, S Origanti, EP Davenport, D Gandhi, K Kaniecki, RA Mehl, ...
Nucleic acids research 45 (16), 9413-9426, 2017
472017
Rapid 40 kb genome construction from 52 parts through data-optimized assembly design
JM Pryor, V Potapov, K Bilotti, N Pokhrel, GJS Lohman
ACS Synthetic Biology 11 (6), 2036-2042, 2022
352022
Phosphate removal and recovery using immobilized phosphate binding proteins
K Venkiteshwaran, N Pokhrel, F Hussein, E Antony, BK Mayer
Water research X 1, 100003, 2018
252018
Hydrogen–deuterium exchange reveals a dynamic DNA-binding map of replication protein A
F Ahmad, A Patterson, J Deveryshetty, JR Mattice, N Pokhrel, B Bothner, ...
Nucleic Acids Research 49 (3), 1455-1469, 2021
192021
The Srs2 helicase dampens DNA damage checkpoint by recycling RPA from chromatin
N Dhingra, S Kuppa, L Wei, N Pokhrel, S Baburyan, X Meng, E Antony, ...
Proceedings of the National Academy of Sciences 118 (8), e2020185118, 2021
122021
Generation of Fluorescent Versions of Saccharomyces cerevisiae RPA to Study the Conformational Dynamics of Its ssDNA-Binding Domains
S Kuppa, N Pokhrel, E Corless, S Origanti, E Antony
Single Stranded DNA Binding Proteins, 151-168, 2021
122021
Rtt105 regulates RPA function by configurationally stapling the flexible domains
S Kuppa, J Deveryshetty, R Chadda, JR Mattice, N Pokhrel, V Kaushik, ...
Nature communications 13 (1), 5152, 2022
112022
Rapid 40 kb genome construction from 52 parts
JM Pryor, V Potapov, N Pokhrel, GJS Lohman
bioRxiv, 2020.12. 22.424019, 2020
72020
A force sensor that converts fluorescence signal into force measurement utilizing short looped DNA
G Mustafa, CY Chuang, WA Roy, MM Farhath, N Pokhrel, Y Ma, ...
Biosensors and Bioelectronics 121, 34-40, 2018
62018
An Aurora B-RPA signaling axis secures chromosome segregation fidelity
P Roshan, S Kuppa, JR Mattice, V Kaushik, R Chadda, N Pokhrel, ...
Nature Communications 14 (1), 3008, 2023
42023
Fluorescent human RPA to track assembly dynamics on DNA
V Kaushik, R Chadda, S Kuppa, N Pokhrel, A Vayyeti, S Grady, C Arnatt, ...
Methods 223, 95-105, 2024
22024
Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
J Deveryshetty, R Chadda, JR Mattice, S Karunakaran, MJ Rau, K Basore, ...
Nature Communications 14 (1), 6215, 2023
22023
C-terminus induced asymmetry within a Rad52 homodecamer dictates single-position Rad51 nucleation in homologous recombination.
J Deveryshetty, R Chadda, J Mattice, S Karunakaran, MJ Rau, K Basore, ...
Biorxiv: the Preprint Server for Biology, 2023
2*2023
Rtt105 configurationally staples RPA and blocks facilitated exchange and interactions with RPA-interacting proteins
S Kuppa, J Deveryshetty, R Chadda, J Mattice, N Pokhrel, V Kaushik, ...
bioRxiv, 2022.02. 05.479199, 2022
12022
KIF3A accelerates KIF3C within the kinesin-2 heterodimer to generate symmetrical phosphate release rates for each processive step
SM Quinn, T Vargason, N Pokhrel, E Antony, J Hahn, SP Gilbert
Journal of Biological Chemistry 296, 2021
12021
Dynamics and selective remodeling of the DNA binding domains of RPA
N Pokhrel, CC Caldwell, EI Corless, EA Tillison, J Tibbs, N Jocic, ...
bioRxiv, 435636, 2018
12018
Cryo-EM reveals the mechanism of mediator-driven Rad51 filament formation in homologous recombination
J Deveryshetty, R Chadda, J Mattice, M Rau, S Karunakaran, N Pokhrel, ...
Acta Crystallographica Section A: Foundations of Crystallography 79, a197-a197, 2022
2022
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