Alison E Mather
Alison E Mather
Quadram Institute
Verified email at quadram.ac.uk
Title
Cited by
Cited by
Year
A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic
MTG Holden, LY Hsu, K Kurt, LA Weinert, AE Mather, SR Harris, ...
Genome research 23 (4), 653-664, 2013
3682013
Dense genomic sampling identifies highways of pneumococcal recombination
C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ...
Nature genetics 46 (3), 305-309, 2014
2962014
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events
VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ...
Nature genetics 47 (6), 632-639, 2015
2892015
Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts
AE Mather, SWJ Reid, DJ Maskell, J Parkhill, MC Fookes, SR Harris, ...
Science 341 (6153), 1514-1517, 2013
2692013
ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads
M Hunt, AE Mather, L Sánchez-Busó, AJ Page, J Parkhill, JA Keane, ...
Microbial genomics 3 (10), 2017
1862017
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes
C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ...
PLoS Genet 10 (8), e1004547, 2014
1432014
Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings
NA Feasey, J Hadfield, KH Keddy, TJ Dallman, J Jacobs, X Deng, ...
Nature Genetics, 2016
812016
Microevolution of Monophasic Salmonella Typhimurium during Epidemic, United Kingdom, 2005–2010
L Petrovska, AE Mather, M AbuOun, P Branchu, SR Harris, T Connor, ...
Emerging infectious diseases 22 (4), 617, 2016
752016
An ecological approach to assessing the epidemiology of antimicrobial resistance in animal and human populations
AE Mather, L Matthews, DJ Mellor, R Reeve, MJ Denwood, P Boerlin, ...
Proceedings of the Royal Society B: Biological Sciences, rspb20111975, 2011
672011
The effect of genetic structure on molecular dating and tests for temporal signal
GGR Murray, F Wang, EM Harrison, GK Paterson, AE Mather, SR Harris, ...
Methods in Ecology and Evolution 7 (1), 80-89, 2016
662016
Global and regional dissemination and evolution of Burkholderia pseudomallei
C Chewapreecha, MTG Holden, M Vehkala, N Välimäki, Z Yang, ...
Nature Microbiology 2, 16263, 2017
652017
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ...
Nature communications 7, ncomms12827, 2016
652016
A current perspective on antimicrobial resistance in Southeast Asia
RM Zellweger, J Carrique-Mas, D Limmathurotsakul, NPJ Day, ...
Journal of Antimicrobial Chemotherapy 72 (11), 2963-2972, 2017
572017
Integrated view of Vibrio cholerae in the Americas
D Domman, ML Quilici, MJ Dorman, E Njamkepo, A Mutreja, AE Mather, ...
Science 358 (6364), 789-793, 2017
552017
Global phylogeography and evolutionary history of Shigella dysenteriae type 1
E Njamkepo, N Fawal, A Tran-Dien, J Hawkey, N Strockbine, C Jenkins, ...
Nature Microbiology 1, 16027, 2016
462016
A multi-country outbreak of Salmonella Newport gastroenteritis in Europe associated with watermelon from Brazil, confirmed by whole genome sequencing: October 2011 to January 2012
L Byrne, I Fisher, T Peters, A Mather, N Thomson, B Rosner, H Bernard, ...
Euro surveillance: bulletin Europeen sur les maladies transmissibles …, 2014
432014
Risk factors for hide contamination of Scottish cattle at slaughter with Escherichia coli O157
AE Mather, GT Innocent, SA McEwen, WJ Reilly, DJ Taylor, WB Steele, ...
Preventive veterinary medicine 80 (4), 257-270, 2007
362007
Assessing phenotypic correlation through the multivariate phylogenetic latent liability model
GB Cybis, JS Sinsheimer, T Bedford, AE Mather, P Lemey, MA Suchard
The Annals of Applied Statistics 9 (2), 969-991, 2015
332015
The extant World War 1 dysentery bacillus NCTC1: a genomic analysis
KS Baker, AE Mather, H McGregor, P Coupland, GC Langridge, M Day, ...
The Lancet 384 (9955), 1691-1697, 2014
322014
Invasive Non-typhoidal Salmonella Infections in Asia: Clinical Observations, Disease Outcome and Dominant Serovars from an Infectious Disease Hospital in Vietnam
NPH Lan, TLT Phuong, HN Huu, L Thuy, AE Mather, SE Park, F Marks, ...
PLOS Negl Trop Dis 10 (8), e0004857, 2016
292016
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