John Yates

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W. Hayes McDonaldResearch Assistant Professor of Biochemistry, Vanderbilt UniversityVerified email at vanderbilt.edu
Tao XuCorteva AgriscienceVerified email at corteva.com
Sung Kyu Robin ParkThe Scripps Research InstituteVerified email at scripps.edu
Jimmy K. EngUniversity of WashingtonVerified email at uw.edu
Jeffrey SavasAssistant Professor of Neurology, Northwestern University Feinberg School of MedicineVerified email at northwestern.edu
Laurence FlorensHead, Proteomics. Stowers InstituteVerified email at stowers.org
Michael WashburnDepartment of Cancer Biology, University of Kansas Medical CenterVerified email at kumc.edu
James WohlschlegelProfessor of Biological Chemistry, UCLAVerified email at mednet.ucla.edu
Michael MacCossProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Paulo Costa CarvalhoCarlos Chagas Institute, Fiocruz - Paraná, BrazilVerified email at pcarvalho.com
Donald F HuntProfessor of Chemistry, University of VirginiaVerified email at virginia.edu
David L. TabbProfessor, Stellenbosch UniversityVerified email at sun.ac.za
Rovshan G. SadygovProfessor, University of Texas Medical BranchVerified email at utmb.edu
judith coppingerRoyal college of surgeons in IrelandVerified email at rcsi.ie
Jerry L. WorkmanInvestigator, Stowers InstituteVerified email at stowers.org
Patrick R GriffinProfessor of Molecular Medicine, Scripps ResearchVerified email at scripps.edu
Cristian RuseNew England BioLabsVerified email at neb.com
Meng-Qiu DongNational Institute of Biological Sciences, BeijingVerified email at nibs.ac.cn
Yaoyang ZhangInterdisciplinary Research Center on Biology and Chemistry, Chinese Academy of SciencesVerified email at sioc.ac.cn
Paul RussellScripps Research InstituteVerified email at scripps.edu

John Yates

Ernest W. Hahn Professor @ The Scripps Research Institute

Verified email at scripps.edu

Mass Spectrometry Proteomics


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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database JK Eng, AL McCormack, JR Yates Journal of the american society for mass spectrometry 5 (11), 976-989, 1994	7356	1994
Large-scale analysis of the yeast proteome by multidimensional protein identification technology MP Washburn, D Wolters, JR Yates Nature biotechnology 19 (3), 242-247, 2001	5719	2001
Direct analysis of protein complexes using mass spectrometry AJ Link, J Eng, DM Schieltz, E Carmack, GJ Mize, DR Morris, BM Garvik, ... Nature biotechnology 17 (7), 676-682, 1999	2993	1999
A model for random sampling and estimation of relative protein abundance in shotgun proteomics H Liu, RG Sadygov, JR Yates Analytical chemistry 76 (14), 4193-4201, 2004	2879	2004
Wnt proteins are lipid-modified and can act as stem cell growth factors K Willert, JD Brown, E Danenberg, AW Duncan, IL Weissman, T Reya, ... Nature 423 (6938), 448-452, 2003	2728	2003
An automated multidimensional protein identification technology for shotgun proteomics DA Wolters, MP Washburn, JR Yates Analytical chemistry 73 (23), 5683-5690, 2001	2279	2001
Microglia promote learning-dependent synapse formation through brain-derived neurotrophic factor CN Parkhurst, G Yang, I Ninan, JN Savas, JR Yates III, JJ Lafaille, ... Cell 155 (7), 1596-1609, 2013	1856	2013
A proteomic view of the Plasmodium falciparum life cycle L Florens, MP Washburn, JD Raine, RM Anthony, M Grainger, JD Haynes, ... Nature 419 (6906), 520-526, 2002	1589	2002
Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database JR Yates, JK Eng, AL McCormack, D Schieltz Analytical chemistry 67 (8), 1426-1436, 1995	1563	1995
Protein sequencing by tandem mass spectrometry. DF Hunt, JR Yates 3rd, J Shabanowitz, S Winston, CR Hauer Proceedings of the National Academy of Sciences 83 (17), 6233-6237, 1986	1551	1986
DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics DL Tabb, WH McDonald, JR Yates Journal of proteome research 1 (1), 21-26, 2002	1474	2002
The hMre11/hRad50 protein complex and Nijmegen breakage syndrome: linkage of double-strand break repair to the cellular DNA damage response JP Carney, RS Maser, H Olivares, EM Davis, M Le Beau, JR Yates III, ... Cell 93 (3), 477-486, 1998	1430	1998
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription MJ Carrozza, B Li, L Florens, T Suganuma, SK Swanson, KK Lee, ... Cell 123 (4), 581-592, 2005	1396	2005
Protein analysis by shotgun/bottom-up proteomics Y Zhang, BR Fonslow, B Shan, MC Baek, JR Yates III Chemical reviews 113 (4), 2343-2394, 2013	1362	2013
Proteomics by mass spectrometry: approaches, advances, and applications JR Yates, CI Ruse, A Nakorchevsky Annual review of biomedical engineering 11 (1), 49-79, 2009	1314	2009
Assembly and aggregation properties of synthetic Alzheimer's A4/beta amyloid peptide analogs. GC Burdick D1, Soreghan B, Kwon M, Kosmoski J, Knauer M, Henschen A, Yates J ... Journal of Biological Chemistry 267 (1), 546-54, 1992	1305	1992
Role of Rpn11 Metalloprotease in Deubiquitination and Degradation by the 26S Proteasome R Verma, L Aravind, R Oania, WH McDonald, JR Yates III, EV Koonin, ... Science 298 (5593), 611-615, 2002	1226	2002
Mass spectrometry and the age of the proteome JR Yates III Journal of Mass Spectrometry 33 (1), 1-19, 1998	1103	1998
A Comprehensive Survey of the Plasmodium Life Cycle by Genomic, Transcriptomic, and Proteomic Analyses N Hall, M Karras, JD Raine, JM Carlton, TWA Kooij, M Berriman, L Florens, ... Science 307 (5706), 82-86, 2005	949	2005
Peptide mass maps: a highly informative approach to protein identification JR Yates, S Speicher, PR Griffin, T Hunkapiller Analytical biochemistry 214 (2), 397-408, 1993	909	1993

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