| A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function JD Cahoy, B Emery, A Kaushal, LC Foo, JL Zamanian, KS Christopherson, ... Journal of Neuroscience 28 (1), 264-278, 2008 | 3454 | 2008 |
| rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data S Shen, JW Park, Z Lu, L Lin, MD Henry, YN Wu, Q Zhou, Y Xing Proceedings of the National Academy of Sciences 111 (51), E5593-E5601, 2014 | 2201 | 2014 |
| m6A RNA modification controls cell fate transition in mammalian embryonic stem cells PJ Batista, B Molinie, J Wang, K Qu, J Zhang, L Li, DM Bouley, E Lujan, ... Cell stem cell 15 (6), 707-719, 2014 | 1207 | 2014 |
| The bifunctional microRNA miR-9/miR-9* regulates REST and CoREST and is downregulated in Huntington's disease AN Packer, Y Xing, SQ Harper, L Jones, BL Davidson Journal of Neuroscience 28 (53), 14341-14346, 2008 | 822 | 2008 |
| Structure and activity of putative intronic miRNA promoters AM Monteys, RM Spengler, J Wan, L Tecedor, KA Lennox, Y Xing, ... Rna 16 (3), 495-505, 2010 | 535 | 2010 |
| Detection of splice junctions from paired-end RNA-seq data by SpliceMap KF Au, H Jiang, L Lin, Y Xing, WH Wong Nucleic acids research 38 (14), 4570-4578, 2010 | 453 | 2010 |
| Nonallele-specific silencing of mutant and wild-type huntingtin demonstrates therapeutic efficacy in Huntington's disease mice RL Boudreau, JL McBride, I Martins, S Shen, Y Xing, BJ Carter, ... Molecular Therapy 17 (6), 1053-1063, 2009 | 416 | 2009 |
| An ESRP‐regulated splicing programme is abrogated during the epithelial–mesenchymal transition CC Warzecha, P Jiang, K Amirikian, KA Dittmar, H Lu, S Shen, W Guo, ... The EMBO journal 29 (19), 3286-3300, 2010 | 414 | 2010 |
| m6A-LAIC-seq reveals the census and complexity of the m6A epitranscriptome B Molinie, J Wang, KS Lim, R Hillebrand, Z Lu, N Van Wittenberghe, ... Nature Methods, 2016 | 388 | 2016 |
| Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs C Zhou, B Molinie, K Daneshvar, JV Pondick, J Wang, ... Cell reports 20 (9), 2262-2276, 2017 | 382 | 2017 |
| MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data S Shen, JW Park, J Huang, KA Dittmar, Z Lu, Q Zhou, RP Carstens, Y Xing Nucleic Acids Research, 2012 | 377 | 2012 |
| The expanding landscape of alternative splicing variation in human populations E Park, Z Pan, Z Zhang, L Lin, Y Xing The American Journal of Human Genetics 102 (1), 11-26, 2018 | 365 | 2018 |
| Alternative splicing and RNA selection pressure—evolutionary consequences for eukaryotic genomes Y Xing, C Lee Nature Reviews Genetics 7 (7), 499-509, 2006 | 315 | 2006 |
| The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events CC Warzecha, S Shen, Y Xing, RP Carstens RNA biology 6 (5), 546-562, 2009 | 250 | 2009 |
| BS69/ZMYND11 reads and connects histone H3. 3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing R Guo, L Zheng, JW Park, R Lv, H Chen, F Jiao, W Xu, S Mu, H Wen, ... Molecular cell 56 (2), 298-310, 2014 | 233 | 2014 |
| Transcriptome-wide discovery of microRNA binding sites in human brain RL Boudreau, P Jiang, BL Gilmore, RM Spengler, R Tirabassi, JA Nelson, ... Neuron 81 (2), 294-305, 2014 | 230 | 2014 |
| Transcriptome-wide analyses of CstF64–RNA interactions in global regulation of mRNA alternative polyadenylation C Yao, J Biesinger, J Wan, L Weng, Y Xing, X Xie, Y Shi Proceedings of the National Academy of Sciences 109 (46), 18773-18778, 2012 | 220 | 2012 |
| ASAP: the alternative splicing annotation project C Lee, L Atanelov, B Modrek, Y Xing Nucleic acids research 31 (1), 101-105, 2003 | 215 | 2003 |
| Global analysis of alternative splicing differences between humans and chimpanzees JA Calarco, Y Xing, M Cáceres, JP Calarco, X Xiao, Q Pan, C Lee, ... Genes & development 21 (22), 2963-2975, 2007 | 204 | 2007 |
| Rbfox proteins regulate splicing as part of a large multiprotein complex LASR A Damianov, Y Ying, CH Lin, JA Lee, D Tran, AA Vashisht, ... Cell 165 (3), 606-619, 2016 | 199 | 2016 |
Lan LinAssistant professor, UPennVerified email at chop.edu
