| Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism I Vujkovic-Cvijin, RM Dunham, S Iwai, MC Maher, RG Albright, ... Science translational medicine 5 (193), 193ra91-193ra91, 2013 | 746 | 2013 |
| Piphillin: improved prediction of metagenomic content by direct inference from human microbiomes S Iwai, T Weinmaier, BL Schmidt, DG Albertson, NJ Poloso, K Dabbagh, ... PloS one 11 (11), e0166104, 2016 | 329 | 2016 |
| Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease FJ Ryan, AM Ahern, RS Fitzgerald, EJ Laserna-Mendieta, EM Power, ... Nature communications 11 (1), 1512, 2020 | 209 | 2020 |
| Gene-targeted-metagenomics reveals extensive diversity of aromatic dioxygenase genes in the environment S Iwai, B Chai, WJ Sul, JR Cole, SA Hashsham, JM Tiedje The ISME journal 4 (2), 279-285, 2010 | 163 | 2010 |
| Comparison of the specificities and efficacies of primers for aromatic dioxygenase gene analysis of environmental samples S Iwai, TA Johnson, B Chai, SA Hashsham, JM Tiedje Applied and environmental microbiology 77 (11), 3551-3557, 2011 | 90 | 2011 |
| Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter CR Penton, TA Johnson, JF Quensen III, S Iwai, JR Cole, JM Tiedje Frontiers in microbiology 4, 279, 2013 | 85 | 2013 |
| Oral and airway microbiota in HIV-infected pneumonia patients S Iwai, M Fei, D Huang, S Fong, A Subramanian, K Grieco, SV Lynch, ... Journal of clinical microbiology 50 (9), 2995-3002, 2012 | 84 | 2012 |
| Microbiota studies in the bile duct strongly suggest a role for Helicobacter pylori in extrahepatic cholangiocarcinoma F Avilés-Jiménez, A Guitron, F Segura-López, A Mendez-Tenorio, S Iwai, ... Clinical Microbiology and Infection 22 (2), 178. e11-178. e22, 2016 | 82 | 2016 |
| Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences NR Narayan, T Weinmaier, EJ Laserna-Mendieta, MJ Claesson, ... BMC genomics 21, 1-12, 2020 | 81 | 2020 |
| Immune response and mortality risk relate to distinct lung microbiomes in patients with HIV and pneumonia MK Shenoy, S Iwai, DL Lin, W Worodria, I Ayakaka, P Byanyima, ... American journal of respiratory and critical care medicine 195 (1), 104-114, 2017 | 73 | 2017 |
| The lung microbiome of Ugandan HIV-infected pneumonia patients is compositionally and functionally distinct from that of San Franciscan patients S Iwai, D Huang, S Fong, LG Jarlsberg, W Worodria, S Yoo, ... PloS one 9 (4), e95726, 2014 | 64 | 2014 |
| Novel biphenyl-oxidizing bacteria and dioxygenase genes from a Korean tidal mudflat TK Lee, J Lee, WJ Sul, S Iwai, B Chai, JM Tiedje, J Park Applied and environmental microbiology 77 (11), 3888-3891, 2011 | 38 | 2011 |
| Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay B Chai, TV Tsoi, S Iwai, C Liu, JA Fish, C Gu, TA Johnson, G Zylstra, ... PLoS One 11 (6), e0157008, 2016 | 35 | 2016 |
| Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism. Sci Transl Med 5: 193ra91 I Vujkovic-Cvijin, RM Dunham, S Iwai, MC Maher, RG Albright, ... | 29 | 2013 |
| Multi-angle meta-analysis of the gut microbiome in Autism Spectrum Disorder: A step toward understanding patient subgroups KA West, X Yin, EM Rutherford, B Wee, J Choi, BS Chrisman, KL Dunlap, ... Scientific Reports 12 (1), 17034, 2022 | 23 | 2022 |
| A comparative evaluation of tools to predict metabolite profiles from microbiome sequencing data X Yin, T Altman, E Rutherford, KA West, Y Wu, J Choi, PL Beck, ... Frontiers in microbiology 11, 595910, 2020 | 23 | 2020 |
| Degradation of Mono-chlorinated Dibenzo-p-Dioxins by Janibacter sp. Strain YA Isolated from River Sediment S Iwai, A Yamazoe, R Takahashi, F Kurisu, O Yagi Current Microbiology 51, 353-358, 2005 | 23 | 2005 |
| Development of an oligonucleotide microarray to detect di-and monooxygenase genes for benzene degradation in soil S Iwai, F Kurisu, H Urakawa, O Yagi, I Kasuga, H Furumai FEMS microbiology letters 285 (1), 111-121, 2008 | 19 | 2008 |
| Gene‐targeted metagenomics (GT Metagenomics) to explore the extensive diversity of genes of interest in microbial communities S Iwai, B Chai, EC Jesus, CR Penton, TK Lee, JR Cole, JM Tiedje Handbook of molecular microbial ecology I: metagenomics and complementary …, 2011 | 16 | 2011 |
| Development of a 60-mer oligonucleotide microarray on the basis of benzene monooxygenase gene diversity S Iwai, F Kurisu, H Urakawa, O Yagi, H Furumai Applied microbiology and biotechnology 75, 929-939, 2007 | 15 | 2007 |
