University of Tokyo, Graduate school of Arts and Sciences
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A mass conserved reaction–diffusion system captures properties of cell polarity
M Otsuji, S Ishihara, K Kaibuchi, A Mochizuki, S Kuroda
PLoS Comput Biol 3 (6), e108, 2007
Bayesian inference of force dynamics during morphogenesis
S Ishihara, K Sugimura
Journal of theoretical biology 313, 201-211, 2012
Unified quantitative characterization of epithelial tissue development
B Guirao, SU Rigaud, F Bosveld, A Bailles, J Lopez-Gay, S Ishihara, ...
Elife 4, e08519, 2015
Phase geometries of two-dimensional excitable waves govern self-organized morphodynamics of amoeboid cells
D Taniguchi, S Ishihara, T Oonuki, M Honda-Kitahara, K Kaneko, S Sawai
Proceedings of the National Academy of Sciences 110 (13), 5016-5021, 2013
Cross talking of network motifs in gene regulation that generates temporal pulses and spatial stripes
S Ishihara, K Fujimoto, T Shibata
Genes to cells 10 (11), 1025-1038, 2005
The mechanical anisotropy in a tissue promotes ordering in hexagonal cell packing
K Sugimura, S Ishihara
Development 140 (19), 4091-4101, 2013
Rectified directional sensing in long-range cell migration
A Nakajima, S Ishihara, D Imoto, S Sawai
Nature communications 5 (1), 1-14, 2014
Network evolution of body plans
K Fujimoto, S Ishihara, K Kaneko
PloS one 3 (7), e2772, 2008
Comparative study of non-invasive force and stress inference methods in tissue
S Ishihara, K Sugimura, SJ Cox, I Bonnet, Y Bellaiche, F Graner
The European Physical Journal E 36 (4), 1-13, 2013
Transient and steady state of mass-conserved reaction-diffusion systems
S Ishihara, M Otsuji, A Mochizuki
Physical Review E 75 (1), 015203, 2007
Turing pattern with proportion preservation
S Ishihara, K Kaneko
Journal of theoretical biology 238 (3), 683-693, 2006
Inference of internal stress in a cell monolayer
V Nier, S Jain, CT Lim, S Ishihara, B Ladoux, P Marcq
Biophysical journal 110 (7), 1625-1635, 2016
Multiciliated cell basal bodies align in stereotypical patterns coordinated by the apical cytoskeleton
E Herawati, D Taniguchi, H Kanoh, K Tateishi, S Ishihara, S Tsukita
Journal of Cell Biology 214 (5), 571-586, 2016
Spontaneous formation of a globally connected contractile network in a microtubule-motor system
T Torisawa, D Taniguchi, S Ishihara, K Oiwa
Biophysical journal 111 (2), 373-385, 2016
Kinetics of the cellular Potts model revisited
A Nakajima, S Ishihara
New Journal of Physics 13 (3), 033035, 2011
From cells to tissue: A continuum model of epithelial mechanics
S Ishihara, P Marcq, K Sugimura
Physical Review E 96 (2), 022418, 2017
Robustness under functional constraint: the genetic network for temporal expression in Drosophila neurogenesis
A Nakajima, T Isshiki, K Kaneko, S Ishihara
PLoS Comput Biol 6 (4), e1000760, 2010
A conceptual molecular network for chemotactic behaviors characterized by feedback of molecules cycling between the membrane and the cytosol
M Otsuji, Y Terashima, S Ishihara, S Kuroda, K Matsushima
Science signaling 3 (152), ra89-ra89, 2010
Mutual interaction in network motifs robustly sharpens gene expression in developmental processes
S Ishihara, T Shibata
Journal of theoretical biology 252 (1), 131-144, 2008
Magic Number in Networks of Threshold Dynamics
S Ishihara, K Kaneko
Physical review letters 94 (5), 058102, 2005
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