Sejin Song
Title
Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
25302019
The treatment-naive microbiome in new-onset Crohn’s disease
D Gevers, S Kugathasan, LA Denson, Y Vázquez-Baeza, W Van Treuren, ...
Cell host & microbe 15 (3), 382-392, 2014
21122014
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
10392017
Cohabiting family members share microbiota with one another and with their dogs
SJ Song, C Lauber, EK Costello, CA Lozupone, G Humphrey, ...
elife 2, e00458, 2013
8002013
Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer
MG Dominguez-Bello, KM De Jesus-Laboy, N Shen, LM Cox, A Amir, ...
Nature medicine 22 (3), 250, 2016
6812016
The microbiome of uncontacted Amerindians
JC Clemente, EC Pehrsson, MJ Blaser, K Sandhu, Z Gao, B Wang, ...
Science advances 1 (3), e1500183, 2015
6042015
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
5782018
Advancing our understanding of the human microbiome using QIIME
JA Navas-Molina, JM Peralta-Sánchez, A González, PJ McMurdie, ...
Methods in enzymology 531, 371-444, 2013
4782013
Microbial community assembly and metabolic function during mammalian corpse decomposition
JL Metcalf, ZZ Xu, S Weiss, S Lax, W Van Treuren, ER Hyde, SJ Song, ...
Science 351 (6269), 158-162, 2016
2902016
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), e00031-18, 2018
2622018
From superspreaders to disease hotspots: linking transmission across hosts and space
SH Paull, S Song, KM McClure, LC Sackett, AM Kilpatrick, PTJ Johnson
Frontiers in Ecology and the Environment 10 (2), 75-82, 2012
2352012
Preservation methods differ in fecal microbiome stability, affecting suitability for field studies
SJ Song, A Amir, JL Metcalf, KR Amato, ZZ Xu, G Humphrey, R Knight
MSystems 1 (3), e00021-16, 2016
2172016
Convergence of gut microbiomes in myrmecophagous mammals
F Delsuc, JL Metcalf, L Wegener Parfrey, SJ Song, A González, R Knight
Molecular ecology 23 (6), 1301-1317, 2014
2072014
The human microbiome in evolution
ER Davenport, JG Sanders, SJ Song, KR Amato, AG Clark, R Knight
BMC biology 15 (1), 1-12, 2017
1602017
The effects of captivity on the mammalian gut microbiome
VJ McKenzie, SJ Song, F Delsuc, TL Prest, AM Oliverio, TM Korpita, ...
Integrative and comparative biology 57 (4), 690-704, 2017
1492017
Tracking down the sources of experimental contamination in microbiome studies
S Weiss, A Amir, ER Hyde, JL Metcalf, SJ Song, R Knight
Genome biology 15 (12), 1-3, 2014
1382014
Balance trees reveal microbial niche differentiation
JT Morton, J Sanders, RA Quinn, D McDonald, A Gonzalez, ...
MSystems 2 (1), e00162-16, 2017
1362017
The bee microbiome: impact on bee health and model for evolution and ecology of host-microbe interactions
P Engel, WK Kwong, Q McFrederick, KE Anderson, SM Barribeau, ...
MBio 7 (2), e02164-15, 2016
1282016
Microbiome analyses of blood and tissues suggest cancer diagnostic approach
GD Poore, E Kopylova, Q Zhu, C Carpenter, S Fraraccio, S Wandro, ...
Nature 579 (7800), 567-574, 2020
1262020
Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes
KR Amato, JG Sanders, SJ Song, M Nute, JL Metcalf, LR Thompson, ...
The ISME journal 13 (3), 576-587, 2019
1052019
The system can't perform the operation now. Try again later.
Articles 1–20