Predicting protein structures with a multiplayer online game S Cooper, F Khatib, A Treuille, J Barbero, J Lee, M Beenen, A Leaver-Fay, ... Nature 466 (7307), 756-760, 2010 | 1867 | 2010 |
Crystal structure of a monomeric retroviral protease solved by protein folding game players F Khatib, F DiMaio, Foldit Contenders Group, Foldit Void Crushers Group, ... Nature structural & molecular biology 18 (10), 1175-1177, 2011 | 708 | 2011 |
Macromolecular modeling and design in Rosetta: recent methods and frameworks JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ... Nature methods 17 (7), 665-680, 2020 | 690 | 2020 |
Algorithm discovery by protein folding game players F Khatib, S Cooper, MD Tyka, K Xu, I Makedon, Z Popović, D Baker, ... Proceedings of the National Academy of Sciences 108 (47), 18949-18953, 2011 | 658 | 2011 |
Increased Diels-Alderase activity through backbone remodeling guided by Foldit players CB Eiben, JB Siegel, JB Bale, S Cooper, F Khatib, BW Shen, F Players, ... Nature biotechnology 30 (2), 190-192, 2012 | 386 | 2012 |
The challenge of designing scientific discovery games S Cooper, A Treuille, J Barbero, A Leaver-Fay, K Tuite, F Khatib, ... Proceedings of the Fifth international Conference on the Foundations of …, 2010 | 248 | 2010 |
De novo protein design by citizen scientists B Koepnick, J Flatten, T Husain, A Ford, DA Silva, MJ Bick, A Bauer, G Liu, ... Nature 570 (7761), 390-394, 2019 | 144 | 2019 |
Foldit Standalone: a video game-derived protein structure manipulation interface using Rosetta R Kleffner, J Flatten, A Leaver-Fay, D Baker, JB Siegel, F Khatib, ... Bioinformatics 33 (17), 2765-2767, 2017 | 122 | 2017 |
WeFold: a coopetition for protein structure prediction GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ... Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014 | 75 | 2014 |
Analysis of social gameplay macros in the Foldit cookbook S Cooper, F Khatib, I Makedon, H Lu, J Barbero, D Baker, J Fogarty, ... Proceedings of the 6th International Conference on Foundations of Digital …, 2011 | 63 | 2011 |
Rapid knot detection and application to protein structure prediction F Khatib, MT Weirauch, CA Rohl Bioinformatics 22 (14), e252-e259, 2006 | 51 | 2006 |
An Enhanced Genetic Algorithm for Ab Initio Protein Structure Prediction MA Rashid, F Khatib, MT Hoque, A Sattar IEEE Transactions on Evolutionary Computation 20 (4), 627-644, 2015 | 45 | 2015 |
Determining crystal structures through crowdsourcing and coursework S Horowitz, B Koepnick, R Martin, A Tymieniecki, AA Winburn, S Cooper, ... Nature communications 7 (1), 12549, 2016 | 44 | 2016 |
High-resolution structure of a retroviral protease folded as a monomer M Gilski, M Kazmierczyk, S Krzywda, H Zábranská, S Cooper, Z Popović, ... Acta Crystallographica Section D: Biological Crystallography 67 (11), 907-914, 2011 | 33 | 2011 |
Introducing Foldit education mode JA Miller, F Khatib, H Hammond, S Cooper, S Horowitz Nature structural & molecular biology 27 (9), 769-770, 2020 | 26 | 2020 |
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ... Scientific reports 8 (1), 9939, 2018 | 24 | 2018 |
Guided macro-mutation in a graded energy based genetic algorithm for protein structure prediction MA Rashid, S Iqbal, F Khatib, MT Hoque, A Sattar Computational biology and chemistry 61, 162-177, 2016 | 24 | 2016 |
Increasing public involvement in structural biology S Cooper, F Khatib, D Baker Structure 21 (9), 1482-1484, 2013 | 18 | 2013 |
Building de novo cryo-electron microscopy structures collaboratively with citizen scientists F Khatib, A Desfosses, Foldit Players, B Koepnick, J Flatten, Z Popović, ... PLoS Biology 17 (11), e3000472, 2019 | 13 | 2019 |
Pokefind: a novel topological filter for use with protein structure prediction F Khatib, CA Rohl, K Karplus Bioinformatics 25 (12), i281-i288, 2009 | 13 | 2009 |