Firas Khatib
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Predicting protein structures with a multiplayer online game
S Cooper, F Khatib, A Treuille, J Barbero, J Lee, M Beenen, A Leaver-Fay, ...
Nature 466 (7307), 756-760, 2010
Crystal structure of a monomeric retroviral protease solved by protein folding game players
F Khatib, F DiMaio, Foldit Contenders Group, Foldit Void Crushers Group, ...
Nature structural & molecular biology 18 (10), 1175-1177, 2011
Algorithm discovery by protein folding game players
F Khatib, S Cooper, MD Tyka, K Xu, I Makedon, Z Popović, D Baker, ...
Proceedings of the National Academy of Sciences 108 (47), 18949-18953, 2011
Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
Increased Diels-Alderase activity through backbone remodeling guided by Foldit players
CB Eiben, JB Siegel, JB Bale, S Cooper, F Khatib, BW Shen, F Players, ...
Nature biotechnology 30 (2), 190-192, 2012
The challenge of designing scientific discovery games
S Cooper, A Treuille, J Barbero, A Leaver-Fay, K Tuite, F Khatib, ...
Proceedings of the Fifth international Conference on the Foundations of …, 2010
De novo protein design by citizen scientists
B Koepnick, J Flatten, T Husain, A Ford, DA Silva, MJ Bick, A Bauer, G Liu, ...
Nature 570 (7761), 390-394, 2019
Foldit Standalone: a video game-derived protein structure manipulation interface using Rosetta
R Kleffner, J Flatten, A Leaver-Fay, D Baker, JB Siegel, F Khatib, ...
Bioinformatics 33 (17), 2765-2767, 2017
WeFold: a coopetition for protein structure prediction
GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ...
Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014
Analysis of social gameplay macros in the Foldit cookbook
S Cooper, F Khatib, I Makedon, H Lu, J Barbero, D Baker, J Fogarty, ...
Proceedings of the 6th International Conference on Foundations of Digital …, 2011
Rapid knot detection and application to protein structure prediction
F Khatib, MT Weirauch, CA Rohl
Bioinformatics 22 (14), e252-e259, 2006
Determining crystal structures through crowdsourcing and coursework
S Horowitz, B Koepnick, R Martin, A Tymieniecki, AA Winburn, S Cooper, ...
Nature communications 7 (1), 12549, 2016
An Enhanced Genetic Algorithm for Ab Initio Protein Structure Prediction
MA Rashid, F Khatib, MT Hoque, A Sattar
IEEE Transactions on Evolutionary Computation 20 (4), 627-644, 2015
High-resolution structure of a retroviral protease folded as a monomer
M Gilski, M Kazmierczyk, S Krzywda, H Zábranská, S Cooper, Z Popović, ...
Acta Crystallographica Section D: Biological Crystallography 67 (11), 907-914, 2011
Introducing Foldit education mode
JA Miller, F Khatib, H Hammond, S Cooper, S Horowitz
Nature structural & molecular biology 27 (9), 769-770, 2020
Guided macro-mutation in a graded energy based genetic algorithm for protein structure prediction
MA Rashid, S Iqbal, F Khatib, MT Hoque, A Sattar
Computational biology and chemistry 61, 162-177, 2016
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ...
Scientific reports 8 (1), 9939, 2018
Increasing public involvement in structural biology
S Cooper, F Khatib, D Baker
Structure 21 (9), 1482-1484, 2013
Building de novo cryo-electron microscopy structures collaboratively with citizen scientists
F Khatib, A Desfosses, Foldit Players, B Koepnick, J Flatten, Z Popović, ...
PLoS Biology 17 (11), e3000472, 2019
Pokefind: a novel topological filter for use with protein structure prediction
F Khatib, CA Rohl, K Karplus
Bioinformatics 25 (12), i281-i288, 2009
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