עקוב אחר
Joshua J Hamilton
Joshua J Hamilton
Federation Bio, Inc.
כתובת אימייל מאומתת בדומיין federation.bio - דף הבית
כותרת
צוטט על ידי
צוטט על ידי
שנה
Metabolic network analysis reveals microbial community interactions in anammox granules
CE Lawson, S Wu, AS Bhattacharjee, JJ Hamilton, KD McMahon, R Goel, ...
Nature communications 8, 15416, 2017
5282017
Design of synthetic human gut microbiome assembly and butyrate production
RL Clark, BM Connors, DM Stevenson, SE Hromada, JJ Hamilton, ...
Nature Communications 12 (1), 1-16, 2021
1052021
Software platforms to facilitate reconstructing genome‐scale metabolic networks
JJ Hamilton, JL Reed
Environmental microbiology 16 (1), 49-59, 2014
1012014
Quantitative Assessment of Thermodynamic Constraints on the Solution Space of Genome-Scale Metabolic Models
JJ Hamilton, V Dwivedi, JL Reed
Biophysical journal 105 (2), 512-522, 2013
732013
Metatranscriptomic and thermodynamic insights into medium-chain fatty acid production using an anaerobic microbiome
MJ Scarborough, CE Lawson, JJ Hamilton, TJ Donohue, DR Noguera
mSystems 3 (6), e00221-18, 2018
722018
Identification of functional differences in metabolic networks using comparative genomics and constraint-based models
JJ Hamilton, JL Reed
PloS one 7 (4), e34670, 2012
672012
TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution
RR Rohwer, JJ Hamilton, RJ Newton, KD McMahon
mSphere 3 (5), e00327-18, 2018
66*2018
Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions
J Feng, Y Qian, Z Zhou, S Ertmer, EI Vivas, F Lan, JJ Hamilton, FE Rey, ...
Cell Host & Microbe 30 (2), 200-215. e12, 2022
492022
Genome–Scale Reconstruction of Metabolic Networks of Lactobacillus casei ATCC 334 and 12A
E Vinay-Lara, JJ Hamilton, B Stahl, JR Broadbent, JL Reed, JL Steele
PLOS ONE 9 (11), e110785, 2014
452014
Thermodynamics and H 2 Transfer in a Methanogenic, Syntrophic Community
JJ Hamilton, M Calixto Contreras, JL Reed
PLOS Comput Biol 11 (7), e1004364, 2015
302015
Understanding and Engineering Distributed Biochemical Pathways in Microbial Communities
X Cao, JJ Hamilton, OS Venturelli
Biochemistry 58 (2), 94-107, 2018
292018
Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI
JJ Hamilton, SL Garcia, BS Brown, BO Oyserman, F Moya-Flores, ...
mSystems 2 (4), e00091-17, 2017
27*2017
Model Communities Hint at Promiscuous Metabolic Linkages between Ubiquitous Free-Living Freshwater Bacteria
SL Garcia, M Buck, JJ Hamilton, C Wurzbacher, HP Grossart, ...
mSphere 3 (3), e00202-18, 2018
232018
Diagnosing and predicting mixed-culture fermentations with unicellular and guild-based metabolic models
MJ Scarborough, JJ Hamilton, EA Erb, TJ Donohue, DR Noguera
Msystems 5 (5), e00755-20, 2020
222020
acI Actinobacteria Assemble a Functional Actinorhodopsin with Natively Synthesized Retinal
JR Dwulit-Smith, JJ Hamilton, DM Stevenson, S He, BO Oyserman, ...
Appl. Environ. Microbiol. 84 (24), e01678-18, 2018
142018
High-complexity synthetic gut bacterial communities
MA Fischbach, AR Brumbaugh, AG Cheng, D Dodd, AJ Aranda-Diaz, ...
US Patent App. 17/999,516, 2023
2023
Microbial consortia
LR Swem, P Kumar, A Bhalla, SA Tripathi, A Parmar, JJ Hamilton, ...
US Patent App. 18/060,831, 2023
2023
MICROBIAL CONSORTIA FOR THE TREATMENT OF DISEASE
L Swem, D Ricci, AR Brumbaugh, J Cremin, JJ Hamilton, S Tripathi, ...
US Patent App. 17/906,060, 2023
2023
POS-461 CREATION OF RATIONALLY DESIGNED AND METABOLICALLY ACTIVE MICROBIOME CONSORTIA FOR TREATMENT OF ENTERIC HYPEROXALURIA
D Ricci, J Hamilton, S Tripathi, A Brumbaugh, J Cremin, N Ou, H LAYMAN, ...
Kidney International Reports 7 (2), S204-S205, 2022
2022
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מאמרים 1–19