| An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding … L Savinkova, I Drachkova, T Arshinova, P Ponomarenko, M Ponomarenko, ... PloS one 8 (2), e54626, 2013 | 84 | 2013 |
| TATA box polymorphisms in human gene promoters and associated hereditary pathologies LK Savinkova, MP Ponomarenko, PM Ponomarenko, IA Drachkova, ... Biochemistry (Moscow) 74, 117-129, 2009 | 77 | 2009 |
| A step-by-step model of TBP/TATA box binding allows predicting human hereditary diseases by single nucleotide polymorphism PM Ponomarenko, LK Savinkova, IA Drachkova, MV Lysova, ... Doklady Biochemistry and Biophysics 419 (1), 88-92, 2008 | 58 | 2008 |
| How to use SNP_TATA_Comparator to find a significant change in gene expression caused by the regulatory SNP of this gene’s promoter via a change in affinity of the TATA-binding … M Ponomarenko, D Rasskazov, O Arkova, P Ponomarenko, V Suslov, ... BioMed Research International 2015, 2015 | 45 | 2015 |
| Toward high-resolution population genomics using archaeological samples I Morozova, P Flegontov, AS Mikheyev, S Bruskin, H Asgharian, ... DNA research 23 (4), 295-310, 2016 | 35 | 2016 |
| Obesity-related known and candidate SNP markers can significantly change affinity of TATA-binding protein for human gene promoters OV Arkova, MP Ponomarenko, DA Rasskazov, IA Drachkova, ... BMC genomics 16, 1-13, 2015 | 33 | 2015 |
| Evidence-based gene models for structural and functional annotations of the oil palm genome KL Chan, TV Tatarinova, R Rosli, N Amiruddin, N Azizi, MAA Halim, ... Biology direct 12, 1-23, 2017 | 32 | 2017 |
| Candidate SNP markers of gender-biased autoimmune complications of monogenic diseases are predicted by a significant change in the affinity of TATA-binding protein for human … MP Ponomarenko, O Arkova, D Rasskazov, P Ponomarenko, L Savinkova, ... Frontiers in Immunology 7, 170259, 2016 | 29 | 2016 |
| Candidate SNP markers of aggressiveness-related complications and comorbidities of genetic diseases are predicted by a significant change in the affinity of TATA-binding … IV Chadaeva, MP Ponomarenko, DA Rasskazov, EB Sharypova, ... BMC genomics 17, 225-239, 2016 | 27 | 2016 |
| Candidate SNP markers of familial and sporadic Alzheimer's diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters P Ponomarenko, I Chadaeva, DA Rasskazov, E Sharypova, EV Kashina, ... Frontiers in Aging Neuroscience 9, 231, 2017 | 26 | 2017 |
| Thermodynamic and kinetic basis for recognition and repair of 8-oxoguanine in DNA by human 8-oxoguanine-DNA glycosylase OO Kirpota, AV Endutkin, MP Ponomarenko, PM Ponomarenko, ... Nucleic acids research 39 (11), 4836-4850, 2011 | 26 | 2011 |
| Candidate SNP markers of chronopathologies are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters P Ponomarenko, D Rasskazov, V Suslov, E Sharypova, L Savinkova, ... BioMed Research International 2016, 2016 | 24 | 2016 |
| SNPs in the HIV-1 TATA box and the AIDS pandemic VV Suslov, PM Ponomarenko, VM Efimov, LK Savinkova, ... Journal of Bioinformatics and Computational Biology 8 (03), 607-625, 2010 | 23 | 2010 |
| Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters IV Chadaeva, PM Ponomarenko, DA Rasskazov, EB Sharypova, ... BMC genomics 19, 15-37, 2018 | 22 | 2018 |
| Sequence-based prediction of transcription upregulation by auxin in plants PM Ponomarenko, MP Ponomarenko Journal of Bioinformatics and Computational Biology 13 (01), 1540009, 2015 | 22 | 2015 |
| Prediction of the affinity of the TATA-binding protein to TATA boxes with single nucleotide polymorphisms PM Ponomarenko, MP Ponomarenko, IA Drachkova, MV Lysova, ... Molecular biology 43, 472-479, 2009 | 20 | 2009 |
| Considering the kinetics of mRNA synthesis in the analysis of the genome and epigenome reveals determinants of co-transcriptional splicing JC Davis-Turak, K Allison, MN Shokhirev, P Ponomarenko, LS Tsimring, ... Nucleic acids research 43 (2), 699-707, 2015 | 19 | 2015 |
| Natural selection equally supports the human tendencies in subordination and domination: a genome-wide study with in silico confirmation and in vivo validation in mice I Chadaeva, P Ponomarenko, D Rasskazov, E Sharypova, E Kashina, ... Frontiers in genetics 10, 73, 2019 | 17 | 2019 |
| TATA box polymorphisms in genes of commercial and laboratory animals and plants associated with selectively valuable traits VV Suslov, PM Ponomarenko, MP Ponomarenko, IA Drachkova, ... Russian Journal of Genetics 46, 394-403, 2010 | 17 | 2010 |
| SNP_TATA_Comparator: genomewide landmarks for preventive personalized medicine M Ponomarenko, D Rasskazov, I Chadaeva, E Sharypova, ... Front. Biosci 9 (2), 276-306, 2017 | 16 | 2017 |
