| Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies A Oulas, C Pavloudi, P Polymenakou, GA Pavlopoulos, N Papanikolaou, ... Bioinformatics and biology insights 9, BBI. S12462, 2015 | 465 | 2015 |
| Systems bioinformatics: increasing precision of computational diagnostics and therapeutics through network-based approaches A Oulas, G Minadakis, M Zachariou, K Sokratous, MM Bourdakou, ... Briefings in bioinformatics 20 (3), 806-824, 2019 | 116 | 2019 |
| Improved grading and survival prediction of human astrocytic brain tumors by artificial neural network analysis of gene expression microarray data LP Petalidis, A Oulas, M Backlund, MT Wayland, L Liu, K Plant, ... Molecular cancer therapeutics 7 (5), 1013-1024, 2008 | 93 | 2008 |
| Prediction of novel microRNA genes in cancer-associated genomic regions—a combined computational and experimental approach A Oulas, A Boutla, K Gkirtzou, M Reczko, K Kalantidis, P Poirazi Nucleic acids research 37 (10), 3276-3287, 2009 | 84 | 2009 |
| Unraveling genomic variation from next generation sequencing data GA Pavlopoulos, A Oulas, E Iacucci, A Sifrim, Y Moreau, R Schneider, ... BioData mining 6, 1-25, 2013 | 83 | 2013 |
| Impaired clearance of apoptotic cells leads to HMGB1 release in the bone marrow of patients with myelodysplastic syndromes and induces TLR4-mediated cytokine production M Velegraki, E Papakonstanti, I Mavroudi, M Psyllaki, C Tsatsanis, ... Haematologica 98 (8), 1206, 2013 | 66 | 2013 |
| Prediction of miRNA targets A Oulas, N Karathanasis, A Louloupi, GA Pavlopoulos, P Poirazi, ... RNA Bioinformatics, 207-229, 2015 | 49 | 2015 |
| MicroRNAs and cancer—the search begins! A Oulas, M Reczko, P Poirazi IEEE Transactions on Information Technology in Biomedicine 13 (1), 67-77, 2009 | 37 | 2009 |
| Integrating multi-source information on a single network to detect disease-related clusters of molecular mechanisms M Zachariou, G Minadakis, A Oulas, S Afxenti, GM Spyrou Journal of proteomics 188, 15-29, 2018 | 36 | 2018 |
| Metagenomic investigation of the geologically unique H ellenic V olcanic A rc reveals a distinctive ecosystem with unexpected physiology A Oulas, PN Polymenakou, R Seshadri, HJ Tripp, M Mandalakis, ... Environmental microbiology 18 (4), 1122-1136, 2016 | 34 | 2016 |
| Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane’s “species minimum” concept C Pavloudi, JB Kristoffersen, A Oulas, M De Troch, C Arvanitidis PeerJ 5, e3687, 2017 | 33 | 2017 |
| Seqenv: linking sequences to environments through text mining L Sinclair, UZ Ijaz, LJ Jensen, MJL Coolen, C Gubry-Rangin, ... PeerJ 4, e2690, 2016 | 31 | 2016 |
| Generalized linear models provide a measure of virulence for specific mutations in SARS-CoV-2 strains A Oulas, M Zanti, M Tomazou, M Zachariou, G Minadakis, MM Bourdakou, ... PLoS One 16 (1), e0238665, 2021 | 30 | 2021 |
| PathwayConnector: finding complementary pathways to enhance functional analysis G Minadakis, M Zachariou, A Oulas, GM Spyrou Bioinformatics 35 (5), 889-891, 2019 | 29 | 2019 |
| GnRH deficient patients with congenital hypogonadotropic hypogonadism: novel genetic findings in ANOS1, RNF216, WDR11, FGFR1, CHD7, and POLR3A genes in a case series and review … V Neocleous, P Fanis, M Toumba, GA Tanteles, M Schiza, F Cinarli, ... Frontiers in endocrinology 11, 550772, 2020 | 27 | 2020 |
| A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2 A Oulas, N Karathanasis, A Louloupi, I Iliopoulos, K Kalantidis, P Poirazi RNA biology 9 (9), 1196-1207, 2012 | 27 | 2012 |
| Multi-omics data integration and network-based analysis drives a multiplex drug repurposing approach to a shortlist of candidate drugs against COVID-19 M Tomazou, MM Bourdakou, G Minadakis, M Zachariou, A Oulas, ... Briefings in bioinformatics 22 (6), bbab114, 2021 | 26 | 2021 |
| Selecting variants of unknown significance through network-based gene-association significantly improves risk prediction for disease-control cohorts A Oulas, G Minadakis, M Zachariou, GM Spyrou Scientific Reports 9 (1), 3266, 2019 | 25 | 2019 |
| DCL‐suppressed Nicotiana benthamiana plants: valuable tools in research and biotechnology K Katsarou, E Mitta, E Bardani, A Oulas, E Dadami, K Kalantidis Molecular plant pathology 20 (3), 432-446, 2019 | 23 | 2019 |
| Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab) C Varsos, T Patkos, A Oulas, C Pavloudi, A Gougousis, UZ Ijaz, ... Biodiversity data journal, 2016 | 23 | 2016 |
